Difference: CemCoursePaperTopics14 (1 vs. 4)

Revision 409 Dec 2014 - Main.CristinaGutierrezVargas

 
META TOPICPARENT name="CemCourseGroup"
Contents

Final papers are due on Dec 20. Send pdf to stokes@nyu.edu

  • Your paper should be about 5 pages of text for the body.
  • Figures should be included to illustrate the structures and mechanisms discussed in the paper.
  • References should be cited within the body of the text and a bibliography included at the end. References and Figures are not included in the 5-page limit.

  • Your Final Paper should be based on several publications related to the general topics listed below.
  • These topics have been chosen because they have been rich for EM analysis. It is up to you to find out why.
  • Papers should include background material setting the context for the topic. A review of relevant literature.
  • Papers should include some discussion of the technical EM methods that have advanced the field.
  • A critical view of the results and conclusions of the literature is encouraged.
  • End with some conclusions/recommendations/future directions. The topics are pretty diverse, so no one template will work for everyone.
  • Please do not choose a topic closely related to the research in your own laboratory. Use this as an opportunity to learn about a new topic.
  • Good luck.

Sign up for Paper Topics in the table below:

  • Go to the bottom of this page.
  • Hit the "Edit" link.
  • Enter your name in between the first set of vertical bars (| |) as in the first example.
  • Hit "Preview Changes" button
  • You may use the "go back" button of your web browser to fix problems
  • "Hit "Save Changes" at the bottom of the preview page to finalize the signup

  • Only one person per topic, unless they all get used up.
  • If you are denied access, it may be because someone else is accessing the page. Try again a little later (or email stokes@nyu.edu)

name topic type of paper
example name "example topic"
  "Effect of specimen temperature on radiation damage" tech
  "Denoising and segmentation of tomographic reconstructions" tech
  "Advantages of the spot scan imaging mode" tech
Changed:
<
<
  "Validation of single particle reconstructions" tech
>
>
Cristina "Validation of single particle reconstructions" tech
 
Malik "Beam-induced movement correction" tech
  "3D reconstruction of HIV envelope glycoprotein tomo
  "Electron tomography of intact cells tomo
  "3D reconstruction of insect flight muscle" tomo
  "Structure of Microtubules in vivo" tomo
  "Atomic structures of icosahedral viruses" SPA
  "Structure of the nuclear pore complex" SPA
Mirjam "Structure of the proteasome" SPA
  "EF-G-mediated translocation as seen by cryo-electron microscopy" SPA
  "Structure of GroEL" SPA
  "Structure of the nicotinic acetylcholine receptor" helical
  "Structure of Tubulin & Microtubules" helical
  "Atomic models describing the interactions of myosin with actin filaments" helical
  "Atomic models describing the interactions kinesins with microtubules" helical
  "Structure of the bacterial flagella" helical
  "Structure of bacteriorhodopsin" 2DX
  "Structure of aquaporin" 2DX

tech = technical
tomo = tomography
SPA = single particle analysis
helical = helical reconstruction
2DX = 2D crystallography

  • Set ALLOWTOPICVIEW =

-- BillRice - 02 Dec 2014

Deleted:
<
<

Revision 305 Dec 2014 - Main.MalikChakerMargot

 
META TOPICPARENT name="CemCourseGroup"
Contents

Final papers are due on Dec 20. Send pdf to stokes@nyu.edu

  • Your paper should be about 5 pages of text for the body.
  • Figures should be included to illustrate the structures and mechanisms discussed in the paper.
  • References should be cited within the body of the text and a bibliography included at the end. References and Figures are not included in the 5-page limit.

  • Your Final Paper should be based on several publications related to the general topics listed below.
  • These topics have been chosen because they have been rich for EM analysis. It is up to you to find out why.
  • Papers should include background material setting the context for the topic. A review of relevant literature.
  • Papers should include some discussion of the technical EM methods that have advanced the field.
  • A critical view of the results and conclusions of the literature is encouraged.
  • End with some conclusions/recommendations/future directions. The topics are pretty diverse, so no one template will work for everyone.
  • Please do not choose a topic closely related to the research in your own laboratory. Use this as an opportunity to learn about a new topic.
  • Good luck.

Sign up for Paper Topics in the table below:

  • Go to the bottom of this page.
  • Hit the "Edit" link.
  • Enter your name in between the first set of vertical bars (| |) as in the first example.
  • Hit "Preview Changes" button
  • You may use the "go back" button of your web browser to fix problems
  • "Hit "Save Changes" at the bottom of the preview page to finalize the signup

  • Only one person per topic, unless they all get used up.
  • If you are denied access, it may be because someone else is accessing the page. Try again a little later (or email stokes@nyu.edu)

name topic type of paper
example name "example topic"
  "Effect of specimen temperature on radiation damage" tech
  "Denoising and segmentation of tomographic reconstructions" tech
  "Advantages of the spot scan imaging mode" tech
  "Validation of single particle reconstructions" tech
Added:
>
>
Malik "Beam-induced movement correction" tech
 
  "3D reconstruction of HIV envelope glycoprotein tomo
  "Electron tomography of intact cells tomo
  "3D reconstruction of insect flight muscle" tomo
  "Structure of Microtubules in vivo" tomo
  "Atomic structures of icosahedral viruses" SPA
  "Structure of the nuclear pore complex" SPA
Mirjam "Structure of the proteasome" SPA
  "EF-G-mediated translocation as seen by cryo-electron microscopy" SPA
  "Structure of GroEL" SPA
  "Structure of the nicotinic acetylcholine receptor" helical
  "Structure of Tubulin & Microtubules" helical
  "Atomic models describing the interactions of myosin with actin filaments" helical
  "Atomic models describing the interactions kinesins with microtubules" helical
  "Structure of the bacterial flagella" helical
  "Structure of bacteriorhodopsin" 2DX
  "Structure of aquaporin" 2DX

tech = technical
tomo = tomography
SPA = single particle analysis
helical = helical reconstruction
2DX = 2D crystallography

  • Set ALLOWTOPICVIEW =

-- BillRice - 02 Dec 2014

Added:
>
>

Revision 203 Dec 2014 - Main.MirjamHunziker

 
META TOPICPARENT name="CemCourseGroup"
Contents

Final papers are due on Dec 20. Send pdf to stokes@nyu.edu

  • Your paper should be about 5 pages of text for the body.
  • Figures should be included to illustrate the structures and mechanisms discussed in the paper.
  • References should be cited within the body of the text and a bibliography included at the end. References and Figures are not included in the 5-page limit.

  • Your Final Paper should be based on several publications related to the general topics listed below.
  • These topics have been chosen because they have been rich for EM analysis. It is up to you to find out why.
  • Papers should include background material setting the context for the topic. A review of relevant literature.
  • Papers should include some discussion of the technical EM methods that have advanced the field.
  • A critical view of the results and conclusions of the literature is encouraged.
  • End with some conclusions/recommendations/future directions. The topics are pretty diverse, so no one template will work for everyone.
  • Please do not choose a topic closely related to the research in your own laboratory. Use this as an opportunity to learn about a new topic.
  • Good luck.

Sign up for Paper Topics in the table below:

  • Go to the bottom of this page.
  • Hit the "Edit" link.
  • Enter your name in between the first set of vertical bars (| |) as in the first example.
  • Hit "Preview Changes" button
  • You may use the "go back" button of your web browser to fix problems
  • "Hit "Save Changes" at the bottom of the preview page to finalize the signup

  • Only one person per topic, unless they all get used up.
  • If you are denied access, it may be because someone else is accessing the page. Try again a little later (or email stokes@nyu.edu)

name topic type of paper
example name "example topic"
  "Effect of specimen temperature on radiation damage" tech
  "Denoising and segmentation of tomographic reconstructions" tech
  "Advantages of the spot scan imaging mode" tech
  "Validation of single particle reconstructions" tech
  "3D reconstruction of HIV envelope glycoprotein tomo
  "Electron tomography of intact cells tomo
  "3D reconstruction of insect flight muscle" tomo
  "Structure of Microtubules in vivo" tomo
  "Atomic structures of icosahedral viruses" SPA
  "Structure of the nuclear pore complex" SPA
Changed:
<
<
  "Structure of the proteasome" SPA
>
>
Mirjam "Structure of the proteasome" SPA
 
  "EF-G-mediated translocation as seen by cryo-electron microscopy" SPA
  "Structure of GroEL" SPA
  "Structure of the nicotinic acetylcholine receptor" helical
  "Structure of Tubulin & Microtubules" helical
  "Atomic models describing the interactions of myosin with actin filaments" helical
  "Atomic models describing the interactions kinesins with microtubules" helical
  "Structure of the bacterial flagella" helical
  "Structure of bacteriorhodopsin" 2DX
  "Structure of aquaporin" 2DX

tech = technical
tomo = tomography
SPA = single particle analysis
helical = helical reconstruction
2DX = 2D crystallography

  • Set ALLOWTOPICVIEW =

-- BillRice - 02 Dec 2014

Revision 102 Dec 2014 - Main.BillRice

 
META TOPICPARENT name="CemCourseGroup"
Contents

Final papers are due on Dec 20. Send pdf to stokes@nyu.edu

  • Your paper should be about 5 pages of text for the body.
  • Figures should be included to illustrate the structures and mechanisms discussed in the paper.
  • References should be cited within the body of the text and a bibliography included at the end. References and Figures are not included in the 5-page limit.

  • Your Final Paper should be based on several publications related to the general topics listed below.
  • These topics have been chosen because they have been rich for EM analysis. It is up to you to find out why.
  • Papers should include background material setting the context for the topic. A review of relevant literature.
  • Papers should include some discussion of the technical EM methods that have advanced the field.
  • A critical view of the results and conclusions of the literature is encouraged.
  • End with some conclusions/recommendations/future directions. The topics are pretty diverse, so no one template will work for everyone.
  • Please do not choose a topic closely related to the research in your own laboratory. Use this as an opportunity to learn about a new topic.
  • Good luck.

Sign up for Paper Topics in the table below:

  • Go to the bottom of this page.
  • Hit the "Edit" link.
  • Enter your name in between the first set of vertical bars (| |) as in the first example.
  • Hit "Preview Changes" button
  • You may use the "go back" button of your web browser to fix problems
  • "Hit "Save Changes" at the bottom of the preview page to finalize the signup

  • Only one person per topic, unless they all get used up.
  • If you are denied access, it may be because someone else is accessing the page. Try again a little later (or email stokes@nyu.edu)

name topic type of paper
example name "example topic"
  "Effect of specimen temperature on radiation damage" tech
  "Denoising and segmentation of tomographic reconstructions" tech
  "Advantages of the spot scan imaging mode" tech
  "Validation of single particle reconstructions" tech
  "3D reconstruction of HIV envelope glycoprotein tomo
  "Electron tomography of intact cells tomo
  "3D reconstruction of insect flight muscle" tomo
  "Structure of Microtubules in vivo" tomo
  "Atomic structures of icosahedral viruses" SPA
  "Structure of the nuclear pore complex" SPA
  "Structure of the proteasome" SPA
  "EF-G-mediated translocation as seen by cryo-electron microscopy" SPA
  "Structure of GroEL" SPA
  "Structure of the nicotinic acetylcholine receptor" helical
  "Structure of Tubulin & Microtubules" helical
  "Atomic models describing the interactions of myosin with actin filaments" helical
  "Atomic models describing the interactions kinesins with microtubules" helical
  "Structure of the bacterial flagella" helical
  "Structure of bacteriorhodopsin" 2DX
  "Structure of aquaporin" 2DX

tech = technical
tomo = tomography
SPA = single particle analysis
helical = helical reconstruction
2DX = 2D crystallography

  • Set ALLOWTOPICVIEW =

-- BillRice - 02 Dec 2014

 
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