Difference: ProteinNmrCourse (15 vs. 16)

Revision 1630 Nov 2018 - Main.MichaelGoger

 Contents

Protein NMR Course -- Fall 2018 

CUNY GRADUATE CENTER
 Office of the Registrar The Graduate Center 
365 Fifth Avenue, Room 7201 
New York, NY 10016-4309 
Email: registrar@gc.cuny.edu 
Phone: (212) 817-7500 
Fax: (212) 817-1627
 www.gc.cuny.edu

Any other questions? see Protein Nmr Course Faqs

A fundamental course for non-expert users. Room A-11 once /week, 15 weeks.

  • Objective -- provide sufficient training for "assisted" determination of < 20 kDa protein structure, using triple resonance and double labeled samples
  • 2o objective -- more than enough detail for most NMR characterization studies of peptides and proteins
  • 3o objective -- provide starting NMR knowledge which can then benefit by fuller treatment in the NmrCourse
  • Precursor requirement undergrad chem NMR
  • Graduate students and Postdocs welcome to audit the class -- if oversubscribed, those seeking credit will be favored over auditors
  • Academic credit -- students should ask their advisors, and consult Consortium Courses
  • Some Frequently Answered Questions -- ProteinNmrCourseFaqs

Request for enrollment, or other comment, by typing below and pressing the "ADD COMMENT" box .

These pages are actively managed on the NYSBC Twiki site. You can register there easily through http://www.nysbc.net/twikiuse or nysbc.org/twikiuse

Active participants

Course formalities

  • Course Name -- Protein NMR Spectroscopy (AKA ProteinNmrCourse )
  • Formal Affiliation -- CUNY BICM 88900. 3 credits.
  • Formal Professorial association -- Prof. R. Ghose, CCNY
  • Informal Affiliation -- NYSBC

FACULTY

RonnieGhose MichaelGoger ShibaniBhattacharya KevinGardner BruceJohnson CharlesSchieters? KevinGarder? DavidCowburn ArtPalmer? PaulRobestelli? JeffHoch?

SYLLABUS TOPICS -- to be organized into individual lectures DRAFT subject to revision

* UPDATED_Protein_NMR_Spec_Fall_2018.pdf: Syllabus Biomolecular NMR Spectroscopy – Principles & Applications Date: First class on Aug 30, 2018 **Presentations: **Time: 2-5 PM, Thursdays** **Place: Room A11 NYSBC* Take-home Midterm Exam (50 %) and Presentations (50 %)

Lecture Notes

* Module_2a.pdf: NMR Basics

* Module_2b.pdf: Pulse field NMR

* Lecture_3a.pdf: Quantum mechanics of spin

* Lecture_3b.pdf: Semi-classical theory of NMR- Density operator

* Lecture_4a.pdf: Product operators and applications

* Lecture_4b.pdf: Fourier transform NMR

* Lecture_5a.pdf: Protein NMR - the HSQC experiment and variants

* Lecture_6.pdf: Side-Chain Experiments

* Lecture_ 7 NMR processing link: https://nmrfx.org/tutorials

* Lecture_8.pdf: Genertation of constraints for structural calculations

* Lecture_9.pdf: Xplor-NIH

* Lecture_ 9 Xplor-NIH tutorial zip file can be found at: http://nmr.cit.nih.gov/xplor-nih/xplor-nih-tutorial.tgz

* Lecture_ 10 NMR relaxation and dynamic pre-class video "Principles of Nuclear Spin Relaxation, Part1" : http://comdnmr.nysbc.org/comd-nmr-educ/comd-nmr-lecture-notes

* NMRBox_NMR_Lecture1_post.pptx.pdf: Lecture_10a NMRBox_NMR_Lecture1_post.pptx.pdf

* NMRBox_NMR_Lecture2_post.pptx.pdf: Lecture_10b

* AUS_NMR_Lecture5.pdf: lecture_10c

* schwieters-ccny-2018.pdf: Xplor-NIH

* 2018-11_NYSBC_NMR_-_isotope_labeling.pdf: module_11a

* Lecture_12a.pdf: Accuracy and Precision of NMR structures

* Lecture_12b_IDP18a.pdf: Intrinsically disordered proteins

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**Registered Students**

Name Lab Institution Credit ? Email
       
-- MichaelGoger - 27 Aug 2018

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