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| META TOPICPARENT | name="NysbcPubs" |
2011 Cho, J. H., Muralidharan, V., Vila-Perello, M., Raleigh, D. P., Muir, T. W., and Palmer, A. G. (2011) Tuning protein autoinhibition by domain destabilization, Nature Structural & Molecular Biology 18, 550-U163.
2010 Shan, B., McClendon, S., Rospigliosi, C., Eliezer, D., and Raleigh, D. P. (2010) The Cold Denatured State of the C-terminal Domain of Protein L9 Is Compact and Contains Both Native and Non-native Structure, Journal of the American Chemical Society 132, 4669-4677. |
> > | Love, J., Mancia, F., Shapiro, L., Punta, M., Rost, B., Girvin, M., Wang, D.-N., Zhou, M., Hunt, J. F., Szyperski, T., Gouaux, E., MacKinnon, R., McDermott, A., Honig, B., Inouye, M., Montelione, G., and Hendrickson, W. A. (2010) The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins, Journal of Structural and Functional Genomics 11. |
| | 2009 Shan, B., Eliezer, D., and Raleigh, D. P. (2009) The Unfolded State of the C-Terminal Domain of the Ribosomal Protein L9 Contains Both Native and Non-Native Structure, Biochemistry 48, 4707-4719.
2008 Huaibin Chen, Chong-Feng Xu, Jinghong Ma, Anna V. Eliseenkova, Wanqing Li, Pamela M. Pollock, Nelly Pitteloud, W. Todd Miller, Thomas A. Neubert, and Moosa Mohammadi. (2008) A crystallographic snapshot of tyrosine trans-phosphorylation in action. PNAS 2008 Dec 16: 105 (50):19660–19665
Parish, D., Benach, J., Liu, G., Singarapu, R., Xiao, R., Acton, T., Hunt, J., Montelione, G., Szyperski, T. Protein Chaperones Q8ZP25_SALTY from Salmonella Typhimurium and HYAE_ECOLI from Escherichia coli Exhibit Thioredoxin-like Structures Despite Lack of Canonical Thioredoxin Active Site Sequence Motif. J Struct Funt Genomics 2008 Nov 26 9 :41-49 a
Xie J, Reverdatto S, Frolov A, Hoffmann R, Burz DS, Shekhtman A. Structural basis for pattern recognition by the receptor for advanced glycation end products (RAGE). J Biol Chem. 2008 Oct 3; 283 (40):27255-69.
Shan B, Bhattacharya S, Eliezer D, Raleigh DP. The Low-pH Unfolded State of the C-Terminal Domain of the Ribosomal Protein L9 Contains Significant Secondary Structure in the Absence of Denaturant but Is No More Compact Than the Low-pH Urea Unfolded State. Biochemistry 2008 Sep 9; 47 (36):9565-73.
Wu J, Li W, Craddock BP, Foreman KW, Mulvihill MJ, Ji QS, Miller WT, Hubbard SR. (2008) Small-molecule inhibition and activation-loop trans-phosphorylation of the IGF1 receptor. EMBO J. Jul 23; 27 (14):1985-94
Burz DS, Shekhtman A. (2008) In-cell biochemistry using NMR spectroscopy. PLoS ONE. 2008 Jul 2; 3 (7):e2571
Liu Q, Dansereau JT, Puttamadappa SS, Shekhtman A, Derbyshire V, Belfort M. (2008) Role of the interdomain linker in distance determination for remote cleavage by homing endonuclease I-TevI. J Mol Biol. 2008 Jun 20; 379 (5):1094-106
Qi Zhang, Hanudatta S. Atreya, Douglas E. Kamen, Mark E. Girvin, Thomas Szyperski (2008) GFT projection NMR based resonance assignment of membrane proteins: application to subunit c of E. coli F1F0 ATP synthase in LPPG micelles J Biomol NMR 2008 40 :157–163
Zhang Q, Atreya HS, Kamen DE, Girvin ME, Szyperski T. (2008) GFT projection NMR based resonance assignment of membrane proteins: application to subunit C of E. coli F(1)F (0) ATP synthase in LPPG micelles. J Biomol NMR, 40, 157-63.
2007 Yakubovskaya E, Lukin M, Chen Z, Berriman J, Wall JS, Kobayashi R, Kisker C, Bogenhagen DF. The EM structure of human DNA polymerase gamma reveals a localized contact between the catalytic and accessory subunits. EMBO J. 26:4283-91
Kempf, J. G.; Jung, J-y.; Ragain, C.; Sampson, N. S.; Loria, J. P.
Dynamic Requirements for a functional protein hinge. 2007 J. Mol. Biol 368: 131-149
2006 Lemaster DM, Hernandez G 'Residue cluster additivity of thermodynamic stability in the hydrophobic core of mesophile vs. hyperthermophile rubredoxins.' Biophys Chem 125: 483-489
Burz, D.S., Dutta, K., Cowburn, D., Shekhtman, A. (2006) Mapping structural interactions in proteins using NMR (STINT-NMR). Nature Methods 3, 93-95 a
Burz, D.S., Dutta, K., Cowburn, D., Shekhtman, A. (2006) Mapping structural interactions in proteins using NMR (STINT-NMR). Nature Protocols, 1, 146-152. a
Muralidharan V., Dutta K., Cho J., Vila-Perello M., Raleigh DP., Cowburn D., Muir TW 'Solution Structure and Folding Characteristics of the C-Terminal SH3 Domain of c-Crk-II' Biochemistry 45, 8874-8884
a
Tang Y, Grey MJ, McKnight J, Palmer AG. Raleigh DP Multistate Folding of the Villin Headpiece Domain. J Mol Biol 355, 1066-1072. a
Tang Y, Goger MJ, Raleigh DP 'NMR Characterization of a Peptide Model
Provides Evidence for Significant Structure in the Unfolded State of
the Villin Headpiece Helical Subdomain.' Biochemistry 45:6940-6946 a
2005 Kempf, JG, Jung, J, Ragain, CM, Sampson, NS, Loria, JP. Entropic Control in Catalysis from the Functional Dynamics of a Protein Hinge. 46th Experimental NMR Conference, Providence, RI (10–15 Apr 2005)
Peng, L., Liu, Y., Kim, N., Readman, J.E., and Grey, C.P. Detection of Brønsted acid sites in zeolite HY with high-field 17O-MAS-NMR techniques. Nature Materials 4 216-219 |