Difference: FilmImage (1 vs. 11)

Revision 1130 Oct 2007 - Main.KdDerr

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • After focusing; while still in Focus mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
Deleted:
<
<

Electron Dose and film OD

  • All microscopes will have emulsion settings to provide OD=0.7 for automatic exposure

  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7

  • Film speeds (according to Kodak literature with 80 kV electrons)
    • factor of 1.0 for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., need 2.75x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., need 5.5x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 5.6 should give OD of ~0.7
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds (from Kodak literature received 1993) - these values were used to derive above factors
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed

Tecnai F20

  • Recommended Emulsion settings
    • 1.0 cryo samples - this will produce film OD = 0.7 for auto exposure time
    • data setting at 1.0 - this will produce reasonably dense numbers with full strength D19 developer
    • 1.4 plastic sections - this will produce film OD = 1.0 for auto exposure time

  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

JEOL2100

  • Faraday cage used by Rob Hynes to check calibration of the beam current measured from the screen
  • 11 pA/cm2 will produce a film OD=1.0 with 1 sec exposure
  • emulsion setting of 19 will produce film OD=1.0 with auto exposure time
  • to calculate specimen dose
    • 1A = 1Coulomb/sec
    • 1pA = 10-12C/sec = 10-12 e-/1.6x10-19 sec = 6.25x106 e-/sec
    • 10 pA/cm2 = 6.25x107e/sec-cm2 * 1 um2/108 A2 = 0.625 e-/sec/um2
    • at mag, multiply above result by mag2*1 um2/108A2
      • at 50,000x, 10 pA/cm2 corresponds to 15.6 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 10 e/A2
      • at 60,000x, 10 pA/cm2 corresponds to 22.5 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 14.4 e/A2
  • CCD counts/electron =

JEOL3200

  • Gatan engineers claim 17.743 counts/electron
    • post-column magnification of 1.3
    • pA/cm2 *11/1000 = nA total current (pA/cm2 measured on small screen)
 


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 1022 Oct 2007 - Main.KdDerr

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
Added:
>
>
    • After focusing; while still in Focus mode
 
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab

Electron Dose and film OD

  • All microscopes will have emulsion settings to provide OD=0.7 for automatic exposure

  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7

  • Film speeds (according to Kodak literature with 80 kV electrons)
    • factor of 1.0 for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., need 2.75x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., need 5.5x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 5.6 should give OD of ~0.7
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds (from Kodak literature received 1993) - these values were used to derive above factors
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed

Tecnai F20

  • Recommended Emulsion settings
    • 1.0 cryo samples - this will produce film OD = 0.7 for auto exposure time
    • data setting at 1.0 - this will produce reasonably dense numbers with full strength D19 developer
    • 1.4 plastic sections - this will produce film OD = 1.0 for auto exposure time

  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

JEOL2100

  • Faraday cage used by Rob Hynes to check calibration of the beam current measured from the screen
  • 11 pA/cm2 will produce a film OD=1.0 with 1 sec exposure
  • emulsion setting of 19 will produce film OD=1.0 with auto exposure time
  • to calculate specimen dose
    • 1A = 1Coulomb/sec
    • 1pA = 10-12C/sec = 10-12 e-/1.6x10-19 sec = 6.25x106 e-/sec
    • 10 pA/cm2 = 6.25x107e/sec-cm2 * 1 um2/108 A2 = 0.625 e-/sec/um2
    • at mag, multiply above result by mag2*1 um2/108A2
      • at 50,000x, 10 pA/cm2 corresponds to 15.6 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 10 e/A2
      • at 60,000x, 10 pA/cm2 corresponds to 22.5 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 14.4 e/A2
  • CCD counts/electron =

JEOL3200

  • Gatan engineers claim 17.743 counts/electron
    • post-column magnification of 1.3
    • pA/cm2 *11/1000 = nA total current (pA/cm2 measured on small screen)


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 930 Aug 2007 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab

Electron Dose and film OD

  • All microscopes will have emulsion settings to provide OD=0.7 for automatic exposure

  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7

  • Film speeds (according to Kodak literature with 80 kV electrons)
    • factor of 1.0 for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., need 2.75x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., need 5.5x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 5.6 should give OD of ~0.7
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds (from Kodak literature received 1993) - these values were used to derive above factors
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed

Tecnai F20

  • Recommended Emulsion settings
    • 1.0 cryo samples - this will produce film OD = 0.7 for auto exposure time
    • data setting at 1.0 - this will produce reasonably dense numbers with full strength D19 developer
    • 1.4 plastic sections - this will produce film OD = 1.0 for auto exposure time

  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

JEOL2100

  • Faraday cage used by Rob Hynes to check calibration of the beam current measured from the screen
  • 11 pA/cm2 will produce a film OD=1.0 with 1 sec exposure
  • emulsion setting of 19 will produce film OD=1.0 with auto exposure time
  • to calculate specimen dose
    • 1A = 1Coulomb/sec
    • 1pA = 10-12C/sec = 10-12 e-/1.6x10-19 sec = 6.25x106 e-/sec
    • 10 pA/cm2 = 6.25x107e/sec-cm2 * 1 um2/108 A2 = 0.625 e-/sec/um2
    • at mag, multiply above result by mag2*1 um2/108A2
      • at 50,000x, 10 pA/cm2 corresponds to 15.6 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 10 e/A2
      • at 60,000x, 10 pA/cm2 corresponds to 22.5 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 14.4 e/A2
Added:
>
>
  • CCD counts/electron =

JEOL3200

  • Gatan engineers claim 17.743 counts/electron
    • post-column magnification of 1.3
    • pA/cm2 *11/1000 = nA total current (pA/cm2 measured on small screen)
 


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 830 Aug 2007 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab

Electron Dose and film OD

  • All microscopes will have emulsion settings to provide OD=0.7 for automatic exposure

  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7

  • Film speeds (according to Kodak literature with 80 kV electrons)
    • factor of 1.0 for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., need 2.75x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., need 5.5x longer exposure to give equivalent film OD
      • i.e., auto exp time with Tecnai emulsion setting of 5.6 should give OD of ~0.7
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds (from Kodak literature received 1993) - these values were used to derive above factors
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed

Tecnai F20

  • Recommended Emulsion settings
    • 1.0 cryo samples - this will produce film OD = 0.7 for auto exposure time
    • data setting at 1.0 - this will produce reasonably dense numbers with full strength D19 developer
    • 1.4 plastic sections - this will produce film OD = 1.0 for auto exposure time

  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

JEOL2100

  • Faraday cage used by Rob Hynes to check calibration of the beam current measured from the screen
  • 11 pA/cm2 will produce a film OD=1.0 with 1 sec exposure
  • emulsion setting of 19 will produce film OD=1.0 with auto exposure time
  • to calculate specimen dose
    • 1A = 1Coulomb/sec
    • 1pA = 10-12C/sec = 10-12 e-/1.6x10-19 sec = 6.25x106 e-/sec
    • 10 pA/cm2 = 6.25x107e/sec-cm2 * 1 um2/108 A2 = 0.625 e-/sec/um2
Changed:
<
<
    • at 50,000x, multiply above result by 500002*1 um2/108A2
>
>
    • at mag, multiply above result by mag2*1 um2/108A2
Added:
>
>
      • at 50,000x, 10 pA/cm2 corresponds to 15.6 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 10 e/A2
      • at 60,000x, 10 pA/cm2 corresponds to 22.5 e/A2
        • but Jaap claims a 0.8 mag factor to small screen, suggesting that 10 pA/cm2 => 14.4 e/A2
 


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 730 Aug 2007 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab

Electron Dose and film OD

Changed:
<
<
  • Recommended Emulsion settings
>
>
  • All microscopes will have emulsion settings to provide OD=0.7 for automatic exposure
Deleted:
<
<
    • 1.4 plastic sections
    • 1.0 cryo samples
    • data setting at 1.0
 
Changed:
<
<
  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose
>
>
  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7
 
  • Film speeds (according to Kodak literature with 80 kV electrons)
Changed:
<
<
    • above data for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
>
>
    • factor of 1.0 for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
 
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
Changed:
<
<
      • i.e., auto exp time with emulsion setting of 2.8 should give OD of ~0.7
>
>
      • i.e., need 2.75x longer exposure to give equivalent film OD
Added:
>
>
      • i.e., auto exp time with Tecnai emulsion setting of 2.8 should give OD of ~0.7
 
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
Changed:
<
<
      • i.e., auto exp time with emulsion setting of 5.6 should give OD of ~0.7
>
>
      • i.e., need 5.5x longer exposure to give equivalent film OD
Added:
>
>
      • i.e., auto exp time with Tecnai emulsion setting of 5.6 should give OD of ~0.7
 
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
Changed:
<
<
    • Kodak relative speeds (from Kodak literature received 1993)
>
>
    • Kodak relative speeds (from Kodak literature received 1993) - these values were used to derive above factors
 
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed
Changed:
<
<
  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7
>
>

Tecnai F20

  • Recommended Emulsion settings
    • 1.0 cryo samples - this will produce film OD = 0.7 for auto exposure time
    • data setting at 1.0 - this will produce reasonably dense numbers with full strength D19 developer
    • 1.4 plastic sections - this will produce film OD = 1.0 for auto exposure time
Added:
>
>
  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

JEOL2100

  • Faraday cage used by Rob Hynes to check calibration of the beam current measured from the screen
  • 11 pA/cm2 will produce a film OD=1.0 with 1 sec exposure
  • emulsion setting of 19 will produce film OD=1.0 with auto exposure time
  • to calculate specimen dose
    • 1A = 1Coulomb/sec
    • 1pA = 10-12C/sec = 10-12 e-/1.6x10-19 sec = 6.25x106 e-/sec
    • 10 pA/cm2 = 6.25x107e/sec-cm2 * 1 um2/108 A2 = 0.625 e-/sec/um2
    • at 50,000x, multiply above result by 500002*1 um2/108A2
 


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 607 Dec 2006 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

Changed:
<
<
  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
>
>
  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
 

Electron Dose and film OD

Changed:
<
<
  • Recommended Emulsion settings
    • 1.4 plastic sections
    • 1.0 cryo samples
    • data setting at 1.0
>
>
  • Recommended Emulsion settings
    • 1.4 plastic sections
    • 1.0 cryo samples
    • data setting at 1.0
 
Changed:
<
<
  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose
>
>
  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose
 
Changed:
<
<
  • Film speeds (according to Kodak literature with 80 kV electrons)
    • above data for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., auto exp time with emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., auto exp time with emulsion setting of 5.6 should give OD of ~0.7
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds (from Kodak literature received 1993)
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed
>
>
  • Film speeds (according to Kodak literature with 80 kV electrons)
    • above data for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., auto exp time with emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., auto exp time with emulsion setting of 5.6 should give OD of ~0.7
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds (from Kodak literature received 1993)
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed
 
Added:
>
>
  • John Berriman notes regarding film OD
    • exposure with 1 e/um2 ( 16.7 pA/cm2) 12 mins Full-Strength D19 gives
      • 80kV: OD 2.2
      • 120kV: OD 2.0
      • 200kV: OD 1.4
      • 300kV: OD 1.0
      • 400kV: OD 0.7
 

Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Changed:
<
<
>
>
Deleted:
<
<

Revision 505 May 2006 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab

Electron Dose and film OD

  • Recommended Emulsion settings
    • 1.4 plastic sections
    • 1.0 cryo samples
    • data setting at 1.0

  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

  • Film speeds (according to Kodak literature with 80 kV electrons)
    • above data for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
Changed:
<
<
    • factor of 2.44 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., auto exp time with emulsion setting of 2.8 should give OD of ~0.8
    • factor of 4.88 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., auto exp time with emulsion setting of 5.6 should give OD of ~0.8
>
>
    • factor of 2.75 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., auto exp time with emulsion setting of 2.8 should give OD of ~0.7
    • factor of 5.5 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., auto exp time with emulsion setting of 5.6 should give OD of ~0.7
 
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
Changed:
<
<
    • Kodak relative speeds
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 100
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 45
      • Kodak SO-163 in D-19 full-strength + 1g/L Kodak Anti-Fog No. 1 for 2 min: 40
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 90
>
>
    • Kodak relative speeds (from Kodak literature received 1993)
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 70
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 40
      • Kodak SO-163 in D-19 full-strength + 1g/L benzotriazole (antifog) for 2 min: 15
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 80
 
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 405 May 2006 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
Deleted:
<
<
  • Emulsion density (1.4 plastic sections- 1.0 cryo sections)
    • Emulsion setting generally at 1.0 and Data setting at 1.0
    • This should produce a film OD of 0.7 using the automatic exposure time
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
 
Changed:
<
<
  • Record date and ending plate number in online logbook (Grey Matter) accessible from web browser on TEM data computer
>
>

Electron Dose and film OD

 
Added:
>
>
  • Recommended Emulsion settings
    • 1.4 plastic sections
    • 1.0 cryo samples
    • data setting at 1.0

  • Corresponding film OD and specimen dose at 200kV
    • Using SO-163 film developed for 12-15 min in full-strength D19
    • Automatic exposure times using emulsion setting of 1.0 will produce a film OD of 0.7
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2
    • Automatic exposure times using emulsion setting of 1.4 will produce a film OD of 1.0
    • Automatic exposure times using emulsion setting of 2.0 will produce film OD of 1.4, with corresponding increase in specimen dosage
    • at 100kV, get an increase in film OD of ~1.6 for the same dose

  • Film speeds (according to Kodak literature with 80 kV electrons)
    • above data for Kodak SO-163 developed 12-15 min at full-strength D-19 developer
    • factor of 2.44 for developing in 1:2 dilution of D-19 for 4 min (1 part devloper, 2 parts water)
      • i.e., auto exp time with emulsion setting of 2.8 should give OD of ~0.8
    • factor of 4.88 for Kodak 4489 developed in 1:2 dilution of D-19
      • i.e., auto exp time with emulsion setting of 5.6 should give OD of ~0.8
    • People often use 1:1 dilution for 4 min, which should produce somewhat darker films than 1:2 dilution
    • Kodak relative speeds
      • Kodak electron image plate in D-19 1:2 dil at 20C for 4 min: 100
      • Kodak 4489 in D-19 1:2 dil at 20C for 4 min: 45
      • Kodak SO-163 in D-19 full-strength + 1g/L Kodak Anti-Fog No. 1 for 2 min: 40
      • Kodak SO-163 in D-19 1:2 dil at 20C for 4 min: 90
      • Kodak SO-163 in D-19 full-strength at 20C for 4 min: 220
    • Grain size goes inversely to film speed
 

Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Revision 304 May 2006 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Changed:
<
<
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
  • Emulsion density (1.4 plastic sections- 1.0 cryo sections)

  • Record date and ending plate number in online logbook (Grey Matter) accessible from web browser on TEM data computer


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

>
>
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
  • Emulsion density (1.4 plastic sections- 1.0 cryo sections)
    • Emulsion setting generally at 1.0 and Data setting at 1.0
    • This should produce a film OD of 0.7 using the automatic exposure time
    • film OD of 0.7 corresponds to 0.5 electrons/um2, which at 50kx corresponds to 12.5 electrons/A2

  • Record date and ending plate number in online logbook (Grey Matter) accessible from web browser on TEM data computer


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Added:
>
>

Revision 222 Mar 2005 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
  • Emulsion density (1.4 plastic sections- 1.0 cryo sections)

  • Record date and ending plate number in online logbook (Grey Matter) accessible from web browser on TEM data computer


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

Added:
>
>

Revision 118 Mar 2005 - Main.DavidStokes

 
META TOPICPARENT name="TecnaiInstructions"
Return to the Cryo EM Website at http://www.nysbc.org/facilities/CEM


Taking a film image

  • Insert small screen adjust brightness until the exposure meter reads 1.0 sec (bottom left)
  • Lift screen
  • Cover glass viewing chamber
  • Low Dose mode
    • Click exposure found in exposure tab
  • Other viewing modes
    • Under camera menu
    • Plate camera (user) menu (pullout)
    • Settings Tab
  • Emulsion density (1.4 plastic sections- 1.0 cryo sections)

  • Record date and ending plate number in online logbook (Grey Matter) accessible from web browser on TEM data computer


Visit the Cryo EM Website at http://www.nysbc.org/facilities/CEM

-- DavidStokes - 18 Mar 2005

 
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