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Contents Loading MRC files: Need to select RAW data need to tell it image size (from header) Use "float", data type 1 header is 1024 bytes Loading ...
Contents Making Movies in Amira Instructions for version 3.0 (and above?) from David Stokes (created by Wanzhong He) 1 "install" the following scripts ...
CEM Administration Contacts CEMStaffEmergencyContact EmergencyCall Staff Procedures Ordering, Shipping and Receiving NYSBC Procedures ...
Contents Making a bootable USB thumbdrive from a bootable Windows CD Background Tietz PC on J2100 has non functional CDROM drive Need to back up this PC ...
Contents General guidelines home directory has 20 GB space allocated to all of CEM computing /usr/data has 100 GB of space allocated to all of CEM computing ...
Contents EMAN Refinement Files needed threed.0a.mrc the strating model, perhaps produced by common lines start.hed, start.img the particle stack ...
Notes on Compiling and Using Helical Reconstruction Programs from Toyoshima Lab Migration to Unwin software hfts was modified to add zorg to parameter list for ...
IT resources at the CEMfac List of supported SoftWare EmIP GUI for image processing Tomography MontageNavigator hints on using the Navigator in SerialEM ...
IT resources at the CEMfac TemimpsTwikiToWebList add TWiki pages to TEMIMPS web site CemTwikiToWebList add TWiki pages to public web site CemTwikiToWebListTest ...
Contents Installation of !NumPy and !SciPy on !CentOS systems Issues numpy and scipy are required by several systems, such as shape from Imod and leginon ...
Overview Interested in Cryoem? (How to begin a project) CemInterested Cryoem at NYSBC CemIntroduction General info on cryoem at NYSBC CemGeneralInfo ...
Contents Listing of twiki pages to be automatically copied to nysbc web pages Instructions List any pages here that you want to be mirrored on our public site ...
twikipage TemimpsJobs InstallwxPython PlungeFreezing CemProtocPlungefreezing PPPioloformGrids PPFiducialsTomography PPCarbonSandwich ...
Welcome to the CEM home page SAFETY at NYSBC CEM Newsletter EM Related Seminars and Courses New EMG sites Leginon / Appion EMG site New scheduler ...
Contents Linux 64 bit System Notes AMD and 64 bit Compilation Notes gcc under 64 bit linux is 64 bit Use the m32 switch in gcc if you want to compile in ...
Contents Recommended cshrc file setenv PATH /cryoem/fsu tomo/tomo 1.0.8 i686/bin/:/usr/bin:/usr/local/bin:/bin:/sbin:/usr/sbin:/cryoem/bin:/usr/kerberos/bin:/usr ...
Customise this topic; samples and ideas available at TWiki:TWiki.WebLeftBarCookbook. DavidStokes CemfacGroup CemAdmin CemProjects Reimbursement ...
Conversion of a set of Digital Micrograph files to Tiff format: Had a cd of dm3 files, with various filenames, spread across many directories em2em did ...
Contents Mixing 8 and 16/24/32 bit displays in Linux (Redhat) Problem Older display software, such as WEB, does not support displays higher than 8 bit ...
Contents Spider tail command in FC8 and above, starting spider gives an error : sort open failed: 2n: no such file or directory basename: missing operand ...
Contents Processing of Tomograms using the FSU package fiducial free system new scripts automate much hand editing of files list of scripts setup ...
Contents Helical Processing : Initial steps display tube image and transform mrcdisp to display hft to calculate fft (must create id.box file with box ...
Contents IMOD conversion of MRC stack to series of tif images Under "Edit" menu, choose "Movies..." opens up the "3D Mod Movie" Control panel In this ...
Contents 2DX Installation 2DX v2 Nov 14 2007 installed version 2.1 rpm does not work on any of our linux boxes gives floating point exception ...
Contents Prerequisites 1 python 1 gtk and glib. If the FSU software has been installed already then the required libraries should already be present 1 wxGTK ...
Contents Configuration of the Memory Hole on 64 bit AMD Systems The Problem From the official Tyan FAQ: Why does my OS see less than the total memory installed ...
Contents Montage Usage Notes 05 02 06 updated May 2008 Collect gain reference before beginning take a record image of the vacuum (binning 2, 1 sec exposure ...
Contents Making Movies from Image Stills under Linux Required Software 1 ImageMagick for easy format conversion, cropping, etc. 1 mjpegtools for encoding ...
Contents Internal features Fitting a single Kd to multiple shift titration data NmrTitration 1 Demo script LIBRARY:matlab/lib1/titrationscript.html or NmrTitration ...
Contents Prevention of User Password Expiration in Windows (2000,XP) Windows 2000 or XP Must be Administrator 1 Right click My Computer 1 Click Manage ...
Contents Projector Display Right click ATI Select Catalyst Control Center Drag monitor image to clone pane Click yes want to keep settings ...
Contents One Line scripts for sed HANDY ONE LINERS FOR SED (Unix stream editor) Apr. 26, 2004 compiled by Eric Pement pemente at northpark dot edu ...
Contents Instructions for processing Single particle crystals 1 Setup directories: mkdir doc mkdir patch mkdir coran mkdir classavg 2 Convert from mrc ...
Contents List of Supported Software EM Image Processing Program Version Location Installed on cluster? Spider 15.10, 17.12 /cryoem/spider ...
Contents Spider Refinement on the cluster These scripts, modified slightly from the scripts provided with spider v. 15, are for use on the NYSBC cluster ...
Contents Listing of twiki pages to be automatically copied to nysbc web pages Instructions List any pages here that you want to be mirrored on our public site ...
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